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Molecular epidemiology of noroviruses detected in Vietnamese children with acute gastroenteritis from 2012 to 2015

  • T. N. Hoa-Tran
  • , O. Nakagomi
  • , A. T.H. Dao
  • , A. T. Nguyen
  • , C. A. Agbemabiese
  • , H. M. Vu
  • , T. Nakagomi
  • , N. T.H. Thanh
  • National Institute of Hygiene and Epidemiology
  • Nagasaki University

Research output: Contribution to journalArticlepeer-review

16 Citations (Scopus)

Abstract

Noroviruses, an important cause of diarrhoea in humans, are genetically diverse. The recent norovirus seasons recorded the emergence of new recombinants of the capsid and polymerase genotypes, with a global dominance of GII.Pe_GII.4 Sydney 2012 and GII.P17_GII.17 in Asian countries. However, the number of papers reporting the distribution of both polymerase and capsid genotypes circulating among children is scarce, with none from Vietnam. This study described both the polymerase and capsid genotypes of noroviruses circulating in Vietnamese children using stool specimens obtained under the World Health Organization rotavirus surveillance programme from 2012 to 2015. Of 350 specimens tested, noroviruses were detected in 90 (28%) of 319 inpatient specimens and in 9 (29%) of 31 outpatient specimens. The polymerase and capsid genotype combinations of GII.Pe_GII.4 Sydney 2012 and GII.P21_GII.3 were co-dominant (51 and 24%, respectively), both of which were recombinants, contributing to a high proportion (87%) of recombinants among circulating noroviruses. GII.4 variants evolved in the same fashion in Vietnam as in other countries, with amino acid substitutions in the putative variantspecific epitopes of the protruding domain. Unlike neighbouring countries where the predominance of GII.P17_GII.17 was reported, only one GII.P17_GII.17 strain was detected from an outpatient in 2015 in Vietnam. In conclusion, a substantial burden due to norovirus gastroenteritis hospitalizations among Vietnamese children was associated with circulating codominant GII.Pe_GII.4 Sydney 2012 and GII.P21_GII.3 strains. Continued surveillance is necessary to monitor infection caused by GII.4 variants and that of GII.P17_GII.17 noroviruses in paediatric patients in Vietnam.

Original languageEnglish
Pages (from-to)34-45
Number of pages12
JournalJournal of Medical Microbiology
Volume66
Issue number1
DOIs
Publication statusPublished - Jan 2017
Externally publishedYes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Capsid genotype
  • GII.P17_GII.17
  • GII.P21_GII.3
  • GII.Pe_GII.4 Sydney 2012
  • Polymerase genotype
  • Recombinant norovirus

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