Isolation and characterization of microsatellite loci for the large-seeded tree Protorhus Deflexa (Anacardiaceae)

Hiroki Sato, Christopher Adenyo, Tsuyoshi Harata, Satoshi Nanami, Akira Itoh, Yukio Takahata, Miho Inoue-Murayama

Research output: Contribution to journalArticlepeer-review

1 Citation (Scopus)

Abstract

Premise of the study: Protorhus defl exa is an endemic large-seeded tree in Madagascar that depends heavily on insects for cross-pollination and on large-bodied frugivores for seed dispersal. Because such mutualistic relationships are vulnerable to human disturbance, the development of microsatellite markers will enhance analyses of gene fl ow in this tree species in degraded forests. Methods and Results: Nineteen microsatellite markers were developed for P. defl exa using 454 pyrosequencing. The number of alleles ranged from two to nine, and the ranges of observed and expected heterozygosities were 0.200-0.800 and 0.303- 0.821, respectively. The parentage exclusion probability by the 19 loci reached 0.98583 for the fi rst parent and 0.99971 for the second parent. Conclusions: These markers will be useful for studying gene fl ow via pollination and seed dispersal by animals and the genetic structure of P. defl exa in protected and degraded forests in Madagascar.

Original languageEnglish
Article number1300046
JournalApplications in Plant Sciences
Volume2
Issue number1
DOIs
Publication statusPublished - Jan 2014
Externally publishedYes

Keywords

  • 454 pyrosequencing
  • Anacardiaceae
  • Large-seeded plants
  • Microsatellite
  • Protorhus defl exa

Fingerprint

Dive into the research topics of 'Isolation and characterization of microsatellite loci for the large-seeded tree Protorhus Deflexa (Anacardiaceae)'. Together they form a unique fingerprint.

Cite this